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Chromatin and DNA shearing system

Q800R3 Sonicator

A cooled, multi-sample ultrasonic system for chromatin and DNA fragmentation, processing up to 18 sealed tubes with sample volumes from 50 µL to 1 mL.

Q800R3 Sonicator
Product configuration shown; accessories vary by setup.
  • Generator
  • Processing enclosure
  • Chiller

PRODUCT OVERVIEW

Ultrasonic processing.
Matched to your sample.

The Q800R product family is currently presented as the Q800R3 system. It combines high-intensity ultrasound, a rotation system, digital control and a sound-reducing enclosure for parallel processing in commercially available tubes.

The stated DNA fragment range is 150 bp to 3 kb. Multiple rack geometries accommodate different tube sizes and sample volumes. Capacity reaches 18 samples in the appropriate rack; larger tubes use racks with fewer positions.

The complete system includes a chiller, ultrasonic horn, generator, converter, rotation system, cables, tubing and three tube rack options. Programmable memory supports repeatable processing conditions, while the integrated cooling system controls temperature. The listed system warranty is two years.

CAPABILITIES

Features

  • Up to 18 samples per run, rack dependent
  • Sample volumes from 50 µL to 1 mL
  • DNA fragment range of 150 bp to 3 kb
  • Compatible with standard commercially available tubes
  • Programmable memory and digital control
  • Integrated chiller and sound-reducing enclosure
  • Rotating sample system
  • Three tube rack options included
  • Two-year system warranty
Tube holder options for Q800R3
Sealed tubes sit in a cooled processing system. Choose the rack around tube format and sample count.

APPLICATION FIT

Where it works

  • Chromatin fragmentation for ChIP workflows
  • Genomic DNA shearing
  • Mammalian, yeast and C. elegans chromatin
  • Bacterial, human, avian and plant DNA workflows

Processing capacity depends on sample properties, tube or vessel geometry and the selected probe or rack.

TECHNICAL DETAILS

Specifications

Rated power
750 W
Frequency
20 kHz
Sample volume
50 µL to 1 mL
Sample capacity
Up to 18 tubes; rack dependent
DNA fragment range
150 bp to 3 kb
Timer
1 second to 10 hours
Electrical supply
110 V, 50/60 Hz; 220 V configuration also available
Generator (W × L × H)
8 × 15.25 × 8.5 in
Enclosure (W × L × H)
11.5 × 12 × 20 in
Chiller (W × L × H)
13 × 11 × 13 in
Included tube racks
Three options
Warranty
2 years

APPLICATION REFERENCE

Chromatin and DNA protocols

Reported sample conditions illustrate applications of the Q800R system. These are application reference data; results depend on the sample, tube and preparation.

Chromatin shearing: reported sample conditions
ParameterMammalian chromatinYeast chromatinC. elegans chromatin
SampleHEK 293T, two 10 cm dishes, 70-80% confluentWild-type S. pombe, OD 1.3-1.5 in YEAC. elegans culture; nuclear extract 1 mg/mL
Volume300 µL300 µL500 µL
Reported fixation1% formaldehyde, 13 min1% formaldehyde, 15 min2% formaldehyde, 20 min
Amplitude70%100%70%
Pulse timing15 s on / 45 s off20 s on / 40 s off30 s on / 30 s off
Total sonication on-time30 min30 min20 min
Genomic DNA shearing: reported sample conditions
ParameterBacterial genomic DNAHuman skeletal myoblast genomic DNA
Sample / amountE. coli / 250 ngLHCN-M2 skeletal myoblast / 200 ng
Sample volume and tube200 µL in 0.5 mL tube200 µL in 0.5 mL tube
Amplitude20%20%
Pulse timing15 s on / 15 s off15 s on / 15 s off
Total sonication on-timeNo numerical value supplied in the product-page tableNo numerical value supplied in the product-page table

ChIP protocol coverage

  • Broad Institute sample preparation
  • General sample preparation and tissue workflows
  • Human cell lines and mammalian cells
  • C. elegans
  • Yeast and combined yeast/mammalian chromatin
  • 293T cells: two examples
  • T cells
  • HCT116 cells
  • Jurkat and HEK293 cells
  • CH12 cells

DNA shearing protocol coverage

  • Avian blood and tissue genomic DNA
  • Bacterial genomic DNA: two examples
  • Human skeletal myoblast (LHCN-M2) DNA
  • E. coli genomic DNA
  • Human genomic DNA: two examples
  • Plant tissue DNA
  • Plant DNA

System views

Q800R3 cooling system
Q800R3 cooling system
Q800R3 ultrasonic processing enclosure
Q800R3 ultrasonic processing enclosure

PARTS & ACCESSORIES

Available components

Sample tube holders

Sample tube holders

Rack formats include eighteen 0.3 mL thin-wall PCR tubes, twelve 0.5 mL thin-wall PCR tubes, or eight 1.5 mL polystyrene or polypropylene tubes. Two 0.5 mL rack geometries accommodate different tube lengths. Custom rack configurations are available.

Chiller replacement filter

Chiller replacement filter

Particulate filtration for the recirculating cooling water, protecting the chiller internal components.

Replacement coolant containers

Replacement coolant containers

Replacement coolant containers for the cooling system, available in packs of five.

GLEN MILLS APPLICATION SUPPORT

Discuss your sample and process.

Talk with our team about Q800R3 Sonicator, sample volumes and available configurations.

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